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SRX032982: Whole Exome sequencing for the 1000 Genomes Project
176 ILLUMINA (Illumina HiSeq 2000) runs: 135.3M spots, 19.5G bases, 10.6Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection
Submitted by: Broad Institute (BI)
Study: Exome sequencing of (ASW) African ancestry in South West US population
PRJNA59835 • SRP004055 • All experiments • All runs
Samples: pool of 22 samples • Homo sapiens
Library:
Name: Solexa-42316
Instrument: Illumina HiSeq 2000
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward barcode77  reverse

Experiment attributes: (show all 6 attributes...) (hide...)
EXPECTED_BASECALL_TABLE: match_edge="full" max_mismatch="1" min_match="7" r (show full text...)(hide...)
match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_469" member_name="tagged_469_CGCCTTCC" CGCCTTCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_389" member_name="tagged_389_CCAGCACC" CCAGCACC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_818" member_name="tagged_818_TATCCAGG" TATCCAGG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_657" member_name="tagged_657_GCCTAGCC" GCCTAGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_745" member_name="tagged_745_GTCATCTA" GTCATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_320" member_name="tagged_320_CAATAGTC" CAATAGTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_388" member_name="tagged_388_CCAGAGCT" CCAGAGCT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_214" member_name="tagged_214_AGGATCTA" AGGATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_223" member_name="tagged_223_AGGTTATC" AGGTTATC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_426" member_name="tagged_426_CCTATGCC" CCTATGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_579" member_name="tagged_579_GACAGTAA" GACAGTAA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_190" member_name="tagged_190_AGCAATTC" AGCAATTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_584" member_name="tagged_584_GACCTAAC" GACCTAAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_866" member_name="tagged_866_TCGCCTTG" TCGCCTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_899" member_name="tagged_899_TGCAAGTA" TGCAAGTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_861" member_name="tagged_861_TCCTTGGT" TCCTTGGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_583" member_name="tagged_583_GACCGTTG" GACCGTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_375" member_name="tagged_375_CATGCTTA" CATGCTTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_110" member_name="tagged_110_ACAGTTGA" ACAGTTGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_726" member_name="tagged_726_GGTCCAGA" GGTCCAGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_151" member_name="tagged_151_ACTAAGAC" ACTAAGAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_821" member_name="tagged_821_TATCTGCC" TATCTGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_163" member_name="tagged_163_ACTGTATC" ACTGTATC
5 BI attributes: (show...)(hide...)
BI GSSR Sample IDs: 65604.0, 65605.0, 65606.0, 65607.0, 65608.0, 65609.0, 65610.0, 65611.0, 65620.0, 65621.0, 65622.0, 65623.0, 65624.0, 65625.0, 65626.0, 65627.0, 65628.0, 65629.0, 65630.0, 65631.0, 65632.0, 65633.0, 65634.0
BI GSSR Sample LSIDs: broadinstitute.org:bsp.prod.sample:1D9UT, broadinstitute.org:bsp.prod.sample:1D9UU, broadinstitute.org:bsp.prod.sample:1D9UV, broadinstitute.org:bsp.prod.sample:1D9UW, broadinstitute.org:bsp.prod.sample:1D9UX, broadinstitute.org:bsp.prod.sample:1D9UY, broadinstitute.org:bsp.prod.sample:1D9UZ, broadinstitute.org:bsp.prod.sample:1D9V1, broadinstitute.org:bsp.prod.sample:1D9VA, broadinstitute.org:bsp.prod.sample:1D9VB, broadinstitute.org:bsp.prod.sample:1D9VC, broadinstitute.org:bsp.prod.sample:1D9VD, broadinstitute.org:bsp.prod.sample:1D9VE, broadinstitute.org:bsp.prod.sample:1D9VF, broadinstitute.org:bsp.prod.sample:1D9VG, broadinstitute.org:bsp.prod.sample:1D9VH, broadinstitute.org:bsp.prod.sample:1D9VI, broadinstitute.org:bsp.prod.sample:1D9VJ, broadinstitute.org:bsp.prod.sample:1D9VK, broadinstitute.org:bsp.prod.sample:1D9VL, broadinstitute.org:bsp.prod.sample:1D9VM, broadinstitute.org:bsp.prod.sample:1D9VN, broadinstitute.org:bsp.prod.sample:1D9VO
BI Project Name: C454
BI Target Set: whole_exome_agilent_1.1_refseq_plus_3_boosters
BI Work Request ID: 23276
Runs: 176 runs, 135.3M spots, 19.5G bases, 10.6Gb
Run# of Spots# of BasesSizePublished
SRR076408780,471112.4M62.1Mb2010-12-09
SRR076414788,566113.6M63Mb2010-12-09
SRR076422701,406101M56.3Mb2010-12-09
SRR076425877,095126.3M70.4Mb2010-12-09
SRR076433622,65189.7M50.5Mb2010-12-09
SRR076434719,220103.6M58Mb2010-12-09
SRR076442841,620121.2M67.3Mb2010-12-09
SRR076450741,091106.7M59.7Mb2010-12-09
SRR076451753,755108.5M60.9Mb2010-12-09
SRR076465803,822115.8M64.4Mb2010-12-09
SRR076470860,884124M68.9Mb2010-12-09
SRR076471724,104104.3M58.1Mb2010-12-09
SRR076472707,406101.9M56.5Mb2010-12-09
SRR076474823,084118.5M65.9Mb2010-12-09
SRR076477716,547103.2M57.3Mb2010-12-09
There are 161 omitted runs. See all runs in Run Selector.

#Member# of Spots# of Bases
1SRS003668 : tagged_818_TATCCAGG5.9M845.9M
2SRS003669 : tagged_214_AGGATCTA6.6M949.8M
3SRS003671 : tagged_110_ACAGTTGA5.8M830.3M
4SRS003672 : tagged_388_CCAGAGCT6.4M917.4M
5SRS003674 : tagged_320_CAATAGTC6.3M906.9M
6SRS003676 : tagged_579_GACAGTAA5M726.8M
7SRS003677 : tagged_583_GACCGTTG5.6M809.7M
8SRS003678 : tagged_861_TCCTTGGT6M860.4M
9SRS003737 : tagged_821_TATCTGCC6.3M902.8M
10SRS003738 : tagged_223_AGGTTATC7.3M1.1G
11SRS003740 : tagged_163_ACTGTATC6.3M910.3M
12SRS003741 : tagged_426_CCTATGCC6.9M989.4M
13SRS003744 : tagged_745_GTCATCTA6.1M882.3M
14SRS003746 : tagged_584_GACCTAAC5.9M851.7M
15SRS003747 : tagged_866_TCGCCTTG5.7M827.3M
16SRS003748 : tagged_899_TGCAAGTA5.7M819.5M
17SRS003749 : tagged_190_AGCAATTC6.3M901.6M
18SRS003751 : tagged_151_ACTAAGAC6.4M925.6M
19SRS003752 : tagged_375_CATGCTTA6M859.1M
20SRS003755 : tagged_469_CGCCTTCC6.7M967.9M
21SRS003756 : tagged_726_GGTCCAGA5.8M830.8M
22SRS003757 : tagged_657_GCCTAGCC6.4M916.8M
23 : defaultn/an/a

ID:
39926

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